CESM - Historial de revisiones

Lluis.fita en 14:26 13 may 2024

2024-05-13T14:26:49Z

Lluis.fita: /* Machine */

2024-05-13T14:24:20Z

Machine

← Revisión anterior		Revisión del 14:24 13 may 2024
Línea 126:		Línea 126:

	== Machine ==		== Machine ==
	We need to create the configuration for ''hydra''. For that purpose we are going to use the exampled configuration for <CODE>"centos7-linux"</CODE> from file <PRE>cime/config/cesm/machines/config_machines.xml</PRE>. This is its ~~content_~~		We need to create the configuration for ''hydra''. For that purpose we are going to use the exampled configuration for <CODE>"centos7-linux"</CODE> from file <PRE>cime/config/cesm/machines/config_machines.xml</PRE>. This is its content:
	<PRE>		<PRE>
	<machine MACH="~~centos7-linux~~">		<machine MACH="hydra">
	<DESC>		<DESC>
	Example port to ~~centos7 linux system with gcc, netcdf, pnetcdf and mpich~~		Example port to CIMA's hydra
	~~using modules from http://www.admin-magazine.com/HPC/Articles/Environment-Modules~~
	</DESC>		</DESC>
	<NODENAME_REGEX>~~regex.expression.matching.your.machine~~</NODENAME_REGEX>		<NODENAME_REGEX>node</NODENAME_REGEX>
	<OS>LINUX</OS>		<OS>LINUX Debian</OS>
	<PROXY> https://howto.get.out </PROXY>		<PROXY> https://howto.get.out </PROXY>
	<COMPILERS>gnu</COMPILERS>		<COMPILERS>gnu</COMPILERS>
Línea 141:		Línea 140:
	<SAVE_TIMING_DIR> </SAVE_TIMING_DIR>		<SAVE_TIMING_DIR> </SAVE_TIMING_DIR>
	<CIME_OUTPUT_ROOT>$ENV{HOME}/cesm/scratch</CIME_OUTPUT_ROOT>		<CIME_OUTPUT_ROOT>$ENV{HOME}/cesm/scratch</CIME_OUTPUT_ROOT>
	<DIN_LOC_ROOT>~~$ENV{HOME}~~/cesm/inputdata</DIN_LOC_ROOT>		<DIN_LOC_ROOT>/share/cesm/inputdata</DIN_LOC_ROOT>
	<DIN_LOC_ROOT_CLMFORC>~~$ENV{HOME}~~/cesm/inputdata/lmwg</DIN_LOC_ROOT_CLMFORC>		<DIN_LOC_ROOT_CLMFORC>/share/cesm/inputdata/lmwg</DIN_LOC_ROOT_CLMFORC>
	<DOUT_S_ROOT>$ENV{HOME}/cesm/archive/$CASE</DOUT_S_ROOT>		<DOUT_S_ROOT>$ENV{HOME}/cesm/archive/$CASE</DOUT_S_ROOT>
	<BASELINE_ROOT>$ENV{HOME}/cesm/cesm_baselines</BASELINE_ROOT>		<BASELINE_ROOT>$ENV{HOME}/cesm/cesm_baselines</BASELINE_ROOT>
Línea 148:		Línea 147:
	<GMAKE>make</GMAKE>		<GMAKE>make</GMAKE>
	<GMAKE_J>8</GMAKE_J>		<GMAKE_J>8</GMAKE_J>
	<BATCH_SYSTEM>~~none~~</BATCH_SYSTEM>		<BATCH_SYSTEM>pbs</BATCH_SYSTEM>
	<SUPPORTED_BY>me@my.~~address~~</SUPPORTED_BY>		<SUPPORTED_BY>soporte@cima.fcen.uba.ar</SUPPORTED_BY>
	<MAX_TASKS_PER_NODE>8</MAX_TASKS_PER_NODE>		<MAX_TASKS_PER_NODE>128</MAX_TASKS_PER_NODE>
	<MAX_MPITASKS_PER_NODE>8</MAX_MPITASKS_PER_NODE>		<MAX_MPITASKS_PER_NODE>128</MAX_MPITASKS_PER_NODE>
	<PROJECT_REQUIRED>FALSE</PROJECT_REQUIRED>		<PROJECT_REQUIRED>FALSE</PROJECT_REQUIRED>
	<mpirun mpilib="~~default~~">		<mpirun mpilib="impi">
	<executable>mpiexec</executable>		<executable>mpiexec</executable>
	<arguments>		<arguments>
Línea 159:		Línea 158:
	</arguments>		</arguments>
	</mpirun>		</mpirun>
	~~<module_system type="module" allow_error="true">~~
	~~<init_path lang="perl">/usr/share/Modules/init/perl.pm</init_path>~~
	~~<init_path lang="python">/usr/share/Modules/init/python.py</init_path>~~
	~~<init_path lang="csh">/usr/share/Modules/init/csh</init_path>~~
	~~<init_path lang="sh">/usr/share/Modules/init/sh</init_path>~~
	~~<cmd_path lang="perl">/usr/bin/modulecmd perl</cmd_path>~~
	~~<cmd_path lang="python">/usr/bin/modulecmd python</cmd_path>~~
	~~<cmd_path lang="sh">module</cmd_path>~~
	~~<cmd_path lang="csh">module</cmd_path>~~
	~~<modules>~~
	~~<command name="purge"/>~~
	~~</modules>~~
	~~<modules compiler="gnu">~~
	~~<command name="load">compiler/gnu/8.2.0</command>~~
	~~<command name="load">mpi/3.3/gcc-8.2.0</command>~~
	~~<command name="load">tool/netcdf/4.6.1/gcc-8.1.0</command>~~
	~~<command name="load">tool/parallel-netcdf/1.12.1/mpich</command>~~
	~~</modules>~~
	~~</module_system>~~
	<environment_variables>		<environment_variables>
	<env name="OMP_STACKSIZE">256M</env>		<env name="OMP_STACKSIZE">256M</env>

Lluis.fita: /* Downloading the Input data */

2024-05-13T14:12:36Z

Downloading the Input data

← Revisión anterior		Revisión del 14:12 13 may 2024
Línea 199:		Línea 199:

	= Downloading the Input data =		= Downloading the Input data =
			All input data will be downloaded in
			<PRE>
			/share/cesm
			</PRE>

	Input datasets are needed to run the model. CESM input data are available through a separate Subversion input data repository.		Input datasets are needed to run the model. CESM input data are available through a separate Subversion input data repository.

Lluis.fita: /* Downloading CESM2 */

2024-05-13T14:08:34Z

Downloading CESM2

← Revisión anterior		Revisión del 14:08 13 may 2024
Línea 10:		Línea 10:
	= Downloading CESM2 =		= Downloading CESM2 =

	Following [https://escomp.github.io/~~cesm~~/~~release-~~cesm2.2/downloading_cesm.html CESM2 Quick Start Guide] and [https://github.com/ESCOMP/cesm#committing-your-change-to-externals-cfg CESM2 github instructions].		Following [https://escomp.github.io/CESM/versions/cesm2.2/html/downloading_cesm.html CESM2 Quick Start Guide] and [https://github.com/ESCOMP/cesm#committing-your-change-to-externals-cfg CESM2 github instructions].

	Cloning the code:		Cloning the code:

Lluis.fita: /* Clone the repository */

2024-05-13T14:07:34Z

Clone the repository

← Revisión anterior		Revisión del 14:07 13 may 2024
Línea 12:		Línea 12:
	Following [https://escomp.github.io/cesm/release-cesm2.2/downloading_cesm.html CESM2 Quick Start Guide] and [https://github.com/ESCOMP/cesm#committing-your-change-to-externals-cfg CESM2 github instructions].		Following [https://escomp.github.io/cesm/release-cesm2.2/downloading_cesm.html CESM2 Quick Start Guide] and [https://github.com/ESCOMP/cesm#committing-your-change-to-externals-cfg CESM2 github instructions].

	~~== Clone~~ the ~~repository ==~~		Cloning the code:
	<pre>		<pre>
	git clone -b release-cesm2.2.2 git@github.com:ESCOMP/CESM.git my_cesm_sandbox		git clone -b release-cesm2.2.2 git@github.com:ESCOMP/CESM.git my_cesm_sandbox

Lluis.fita: /* Machine */

2024-05-13T14:06:56Z

Machine

← Revisión anterior		Revisión del 14:06 13 may 2024
Línea 126:		Línea 126:

	== Machine ==		== Machine ==
	We need to create the configuration for ''hydra''. For that purpose we are going to use the exampled configuration for <~~PRE~~>"centos7-linux"</~~PRE~~> from file <PRE>cime/config/cesm/machines/config_machines.xml</PRE>. This is its content_		We need to create the configuration for ''hydra''. For that purpose we are going to use the exampled configuration for <CODE>"centos7-linux"</CODE> from file <PRE>cime/config/cesm/machines/config_machines.xml</PRE>. This is its content_
	<PRE>		<PRE>
	<machine MACH="centos7-linux">		<machine MACH="centos7-linux">

Lluis.fita: /* Downloading CESM2 */

2024-05-13T14:06:19Z

Downloading CESM2

← Revisión anterior		Revisión del 14:06 13 may 2024
Línea 10:		Línea 10:
	= Downloading CESM2 =		= Downloading CESM2 =

	Following [https://escomp.github.io/cesm/release-cesm2/downloading_cesm.html CESM2 Quick Start Guide] and [https://github.com/ESCOMP/cesm#committing-your-change-to-externals-cfg CESM2 github instructions].		Following [https://escomp.github.io/cesm/release-cesm2.2/downloading_cesm.html CESM2 Quick Start Guide] and [https://github.com/ESCOMP/cesm#committing-your-change-to-externals-cfg CESM2 github instructions].

	== Clone the repository ==		== Clone the repository ==

Lluis.fita en 14:03 13 may 2024

2024-05-13T14:03:59Z

@@ Línea 38: / Línea 38: @@
 </pre>
 == Checkout the CESM tag ==
 * Go into the newly created CESM repository
 <pre>
 cd my_cesm_sandbox
 </pre>
@@ Línea 119: / Línea 121: @@
 If this is the case, at this point you have a working version of CESM.
 http://esmci.github.io/cime/versions/master/html/users_guide/machine.html

Lluis.fita: /* Clone the repository */

2024-05-13T13:44:20Z

Clone the repository

@@ Línea 26: / Línea 26: @@
 ChangeLog_template  describe_version    Externals_cime.cfg  README.rst
 cime_config         doc                 LICENSE.txt
 </pre>

Lluis.fita: /* Clone the repository */

2024-05-13T13:33:17Z

Clone the repository

← Revisión anterior		Revisión del 13:33 13 may 2024
Línea 14:		Línea 14:
	== Clone the repository ==		== Clone the repository ==
	<pre>		<pre>
	~~git clone -b release-cesm2.2.2z https://github.com/ESCOMP/CESM.git my_cesm_sandbox~~
	git clone -b release-cesm2.2.2 git@github.com:ESCOMP/CESM.git my_cesm_sandbox		git clone -b release-cesm2.2.2 git@github.com:ESCOMP/CESM.git my_cesm_sandbox
	</pre>		</pre>
	<!-- git clone https://github.com/escomp/cesm.git my_cesm_sandbox -->		<!-- git clone https://github.com/escomp/cesm.git my_cesm_sandbox -->
	This will create a directory my_cesm_sandbox/ in your current working directory.		This will create a directory my_cesm_sandbox/ in your current working directory.

			We got the following
			<pre style="shell">
			$ cd my_cesm_sandbox/
			$ ls
			ChangeLog CODE_OF_CONDUCT.md Externals.cfg manage_externals
			ChangeLog_template describe_version Externals_cime.cfg README.rst
			cime_config doc LICENSE.txt
			</pre>

	== Checkout the CESM tag ==		== Checkout the CESM tag ==